CDS

Accession Number TCMCG057C56213
gbkey CDS
Protein Id XP_018462316.1
Location complement(join(3003..3169,3256..3340,3425..3490,3579..3673,3744..3846,3934..4065,4141..4221,4317..4409,4528..4611,4752..4810,4899..4975,5063..5216,5361..5499))
Gene LOC108833388
GeneID 108833388
Organism Raphanus sativus

Protein

Length 444aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018606814.1
Definition PREDICTED: chorismate synthase, chloroplastic-like isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category E
Description Chorismate synthase
KEGG_TC -
KEGG_Module M00022        [VIEW IN KEGG]
KEGG_Reaction R01714        [VIEW IN KEGG]
KEGG_rclass RC00586        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01736        [VIEW IN KEGG]
EC 4.2.3.5        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00400        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01230        [VIEW IN KEGG]
map00400        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01230        [VIEW IN KEGG]
GOs GO:0000166        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004107        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008652        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009072        [VIEW IN EMBL-EBI]
GO:0009073        [VIEW IN EMBL-EBI]
GO:0009423        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010181        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0016829        [VIEW IN EMBL-EBI]
GO:0016835        [VIEW IN EMBL-EBI]
GO:0016838        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043648        [VIEW IN EMBL-EBI]
GO:0043650        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0046417        [VIEW IN EMBL-EBI]
GO:0048037        [VIEW IN EMBL-EBI]
GO:0050662        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGTCTTCTCTCACCTCCAAATCCATTCTCGGATCCACCAAACCAGGCTCTTCTTCTCCTCTGTCTCCGGACCTCCGTCGTCTCTCCTCTCCCGCGGTTCAGATCTCAATCCGAACCCAATCCAAGAAGAACCTCCAGATAATAAAAGCTAGTGGAAGCTCATACGGGACTCACTTTCGAGTTTCCACCTTTGGAGAATCTCATGGAGGAGGCGTTGGCTGTATCATCGACGGGTGTCCTCCTCGGATTCCCCTCTCTGAATCTGATTTGCAATTTGATCTTGATAGGAGGAGACCCGGTCAGAGCCGGATCACGACTCCTAGAAAAGAGACTGATACTTGCCGGATATCTTCTGGTGTCTCCGAAGGAATGACGACGGGAACACCTATCCATGTCTTTGTGCCAAACACTGATCAGAGAGGACTTGATTACAGTGAGATGTCAGTTGCCTATAGGCCATCTCATGCTGATGCTACTTATGACATGAAGTATGGTGTCAGATCAGTACAGGGTGGTGGGAGATCATCAGCTAGAGAGACCATAGGAAGAGTTGCTCCTGGAGCTTTAGCCAAGAAAATCTTGAAGCAATTTGCAGGAACTGAGATTCTTGCCTATGTCTCGCAAGTCCACCAAGTTGTACTTCCAGAGGATTTGGTAGACCACGAGAATCTGACACTCGAACAGATAGAAAATAACATTGTCAGGTGCCCCAATCCAGAGTACGCAGAGAAGATGATAGCTGCCATTGATGCTGTCAGGACTAAAGGGAACTCTGTTGGTGGTGTTGTGACCTGCATCGTTCGTAATGCTCCACGTGGGCTTGGTACGCCGGTGTTCGATAAACTTGAAGCAGAACTGGCAAAAGCTTGTATGTCGTTACCTGCAACAAAGGGCTTTGAGTTTGGCAGTGGCTTCTCTGGTACGTTTCTGACTGGTCTTGAACACAATGATGAGTTCTATACCGATGAGAACGGAAGAATACGAACAAAAACAAACCGATCCGGTGGAATTCAGGGAGGGATATCAAACGGTGAGATAATAAACATGAGAGTAGCCTTCAAGCCAACATCTACAATCGGAAGAAAGCAGAACACTGTAACCAGAGACAAGCAAGAAACAGAGATGATTGCGCGTGGACGTCATGATCCCTGTGTTGTTCCACGAGCTGTGCCGATGGTGGAAGCAATGGTGGCCTTAGTTCTTGTGGATCAATTGATGGCGCAATACGCGCAGTGCCATCTGTTTCCTATAAATCCAGAGCTGCAGGAACCTCTCCGGACAGCTTCTCCTCCTGTCGAGCTTGAGCAGCCGCAAAATGCTGCTGCGTTGTAA
Protein:  
MASSLTSKSILGSTKPGSSSPLSPDLRRLSSPAVQISIRTQSKKNLQIIKASGSSYGTHFRVSTFGESHGGGVGCIIDGCPPRIPLSESDLQFDLDRRRPGQSRITTPRKETDTCRISSGVSEGMTTGTPIHVFVPNTDQRGLDYSEMSVAYRPSHADATYDMKYGVRSVQGGGRSSARETIGRVAPGALAKKILKQFAGTEILAYVSQVHQVVLPEDLVDHENLTLEQIENNIVRCPNPEYAEKMIAAIDAVRTKGNSVGGVVTCIVRNAPRGLGTPVFDKLEAELAKACMSLPATKGFEFGSGFSGTFLTGLEHNDEFYTDENGRIRTKTNRSGGIQGGISNGEIINMRVAFKPTSTIGRKQNTVTRDKQETEMIARGRHDPCVVPRAVPMVEAMVALVLVDQLMAQYAQCHLFPINPELQEPLRTASPPVELEQPQNAAAL